Relative Prevalence of Grapevine Leafroll-Associated Virus Species in Wine Grape-Growing Regions of California.
Identifieur interne : 000434 ( Main/Exploration ); précédent : 000433; suivant : 000435Relative Prevalence of Grapevine Leafroll-Associated Virus Species in Wine Grape-Growing Regions of California.
Auteurs : Abhineet M. Sharma [États-Unis] ; Breanna Baraff [États-Unis] ; John T. Hutchins [États-Unis] ; Michelle K. Wong [États-Unis] ; G Kai Blaisdell [États-Unis] ; Monica L. Cooper [États-Unis] ; Kent M. Daane [États-Unis] ; Rodrigo P P. Almeida [États-Unis]Source :
- PloS one [ 1932-6203 ] ; 2015.
Descripteurs français
- KwdFr :
- MESH :
- génétique : Closteroviridae, Maladies des plantes.
- virologie : Feuilles de plante, Maladies des plantes, Vitis.
- Californie.
English descriptors
- KwdEn :
- MESH :
- geographic : California.
- genetics : Closteroviridae, Plant Diseases.
- virology : Plant Diseases, Plant Leaves, Vitis.
Abstract
Some diseases manifest as one characteristic set of symptoms to the host, but can be caused by multiple pathogens. Control treatments based on plant symptoms can make it difficult to effectively manage such diseases, as the biology of the underlying pathogens can vary. Grapevine leafroll disease affects grapes worldwide, and is associated with several viral species in the family Closteroviridae. Whereas some of the viruses associated with this disease are transmitted by insect vectors, others are only graft-transmissible. In three regions of California, we surveyed vineyards containing diseased vines and screened symptomatic plants for all known viral species associated with grapevine leafroll disease. Relative incidence of each virus species differed among the three regions regions, particularly in relation to species with known vectors compared with those only known to be graft-transmitted. In one region, the pathogen population was dominated by species not known to have an insect vector. In contrast, populations in the other surveyed regions were dominated by virus species that are vector-transmissible. Our survey did not detect viruses associated with grapevine leafroll disease at some sites with characteristic disease symptoms. This could be explained either by undescribed genetic diversity among these viruses that prevented detection with available molecular tools at the time the survey was performed, or a misidentification of visual symptoms that may have had other underlying causes. Based on the differences in relative prevalence of each virus species among regions and among vineyards within regions, we expect that region and site-specific management strategies are needed for effective disease control.
DOI: 10.1371/journal.pone.0142120
PubMed: 26529503
PubMed Central: PMC4631472
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Sharma</name><affiliation wicri:level="1"><nlm:affiliation>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720, United States of America.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720</wicri:regionArea><wicri:noRegion>94720</wicri:noRegion></affiliation></author><author><name sortKey="Baraff, Breanna" sort="Baraff, Breanna" uniqKey="Baraff B" first="Breanna" last="Baraff">Breanna Baraff</name><affiliation wicri:level="1"><nlm:affiliation>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720, United States of America.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720</wicri:regionArea><wicri:noRegion>94720</wicri:noRegion></affiliation></author><author><name sortKey="Hutchins, John T" sort="Hutchins, John T" uniqKey="Hutchins J" first="John T" last="Hutchins">John T. Hutchins</name><affiliation wicri:level="1"><nlm:affiliation>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720, United States of America.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720</wicri:regionArea><wicri:noRegion>94720</wicri:noRegion></affiliation></author><author><name sortKey="Wong, Michelle K" sort="Wong, Michelle K" uniqKey="Wong M" first="Michelle K" last="Wong">Michelle K. Wong</name><affiliation wicri:level="1"><nlm:affiliation>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720, United States of America.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720</wicri:regionArea><wicri:noRegion>94720</wicri:noRegion></affiliation></author><author><name sortKey="Blaisdell, G Kai" sort="Blaisdell, G Kai" uniqKey="Blaisdell G" first="G Kai" last="Blaisdell">G Kai Blaisdell</name><affiliation wicri:level="1"><nlm:affiliation>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720, United States of America.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720</wicri:regionArea><wicri:noRegion>94720</wicri:noRegion></affiliation></author><author><name sortKey="Cooper, Monica L" sort="Cooper, Monica L" uniqKey="Cooper M" first="Monica L" last="Cooper">Monica L. Cooper</name><affiliation wicri:level="1"><nlm:affiliation>University of California Cooperative Extension, 1710 Soscol Avenue, Suite 4, Napa, CA, 94559, United States of America.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>University of California Cooperative Extension, 1710 Soscol Avenue, Suite 4, Napa, CA, 94559</wicri:regionArea><wicri:noRegion>94559</wicri:noRegion></affiliation></author><author><name sortKey="Daane, Kent M" sort="Daane, Kent M" uniqKey="Daane K" first="Kent M" last="Daane">Kent M. Daane</name><affiliation wicri:level="1"><nlm:affiliation>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720, United States of America.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720</wicri:regionArea><wicri:noRegion>94720</wicri:noRegion></affiliation></author><author><name sortKey="Almeida, Rodrigo P P" sort="Almeida, Rodrigo P P" uniqKey="Almeida R" first="Rodrigo P P" last="Almeida">Rodrigo P P. Almeida</name><affiliation wicri:level="1"><nlm:affiliation>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720, United States of America.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720</wicri:regionArea><wicri:noRegion>94720</wicri:noRegion></affiliation></author></analytic><series><title level="j">PloS one</title><idno type="eISSN">1932-6203</idno><imprint><date when="2015" type="published">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>California (MeSH)</term><term>Closteroviridae (genetics)</term><term>Plant Diseases (genetics)</term><term>Plant Diseases (virology)</term><term>Plant Leaves (virology)</term><term>Vitis (virology)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Californie (MeSH)</term><term>Closteroviridae (génétique)</term><term>Feuilles de plante (virologie)</term><term>Maladies des plantes (génétique)</term><term>Maladies des plantes (virologie)</term><term>Vitis (virologie)</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>California</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Closteroviridae</term><term>Plant Diseases</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Closteroviridae</term><term>Maladies des plantes</term></keywords><keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Feuilles de plante</term><term>Maladies des plantes</term><term>Vitis</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Plant Diseases</term><term>Plant Leaves</term><term>Vitis</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Californie</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Some diseases manifest as one characteristic set of symptoms to the host, but can be caused by multiple pathogens. Control treatments based on plant symptoms can make it difficult to effectively manage such diseases, as the biology of the underlying pathogens can vary. Grapevine leafroll disease affects grapes worldwide, and is associated with several viral species in the family Closteroviridae. Whereas some of the viruses associated with this disease are transmitted by insect vectors, others are only graft-transmissible. In three regions of California, we surveyed vineyards containing diseased vines and screened symptomatic plants for all known viral species associated with grapevine leafroll disease. Relative incidence of each virus species differed among the three regions regions, particularly in relation to species with known vectors compared with those only known to be graft-transmitted. In one region, the pathogen population was dominated by species not known to have an insect vector. In contrast, populations in the other surveyed regions were dominated by virus species that are vector-transmissible. Our survey did not detect viruses associated with grapevine leafroll disease at some sites with characteristic disease symptoms. This could be explained either by undescribed genetic diversity among these viruses that prevented detection with available molecular tools at the time the survey was performed, or a misidentification of visual symptoms that may have had other underlying causes. Based on the differences in relative prevalence of each virus species among regions and among vineyards within regions, we expect that region and site-specific management strategies are needed for effective disease control. </div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">26529503</PMID><DateCompleted><Year>2016</Year><Month>06</Month><Day>08</Day></DateCompleted><DateRevised><Year>2019</Year><Month>02</Month><Day>22</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Electronic">1932-6203</ISSN><JournalIssue CitedMedium="Internet"><Volume>10</Volume><Issue>11</Issue><PubDate><Year>2015</Year></PubDate></JournalIssue><Title>PloS one</Title><ISOAbbreviation>PLoS One</ISOAbbreviation></Journal><ArticleTitle>Relative Prevalence of Grapevine Leafroll-Associated Virus Species in Wine Grape-Growing Regions of California.</ArticleTitle><Pagination><MedlinePgn>e0142120</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1371/journal.pone.0142120</ELocationID><Abstract><AbstractText>Some diseases manifest as one characteristic set of symptoms to the host, but can be caused by multiple pathogens. Control treatments based on plant symptoms can make it difficult to effectively manage such diseases, as the biology of the underlying pathogens can vary. Grapevine leafroll disease affects grapes worldwide, and is associated with several viral species in the family Closteroviridae. Whereas some of the viruses associated with this disease are transmitted by insect vectors, others are only graft-transmissible. In three regions of California, we surveyed vineyards containing diseased vines and screened symptomatic plants for all known viral species associated with grapevine leafroll disease. Relative incidence of each virus species differed among the three regions regions, particularly in relation to species with known vectors compared with those only known to be graft-transmitted. In one region, the pathogen population was dominated by species not known to have an insect vector. In contrast, populations in the other surveyed regions were dominated by virus species that are vector-transmissible. Our survey did not detect viruses associated with grapevine leafroll disease at some sites with characteristic disease symptoms. This could be explained either by undescribed genetic diversity among these viruses that prevented detection with available molecular tools at the time the survey was performed, or a misidentification of visual symptoms that may have had other underlying causes. Based on the differences in relative prevalence of each virus species among regions and among vineyards within regions, we expect that region and site-specific management strategies are needed for effective disease control. </AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Sharma</LastName><ForeName>Abhineet M</ForeName><Initials>AM</Initials><AffiliationInfo><Affiliation>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720, United States of America.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Baraff</LastName><ForeName>Breanna</ForeName><Initials>B</Initials><AffiliationInfo><Affiliation>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720, United States of America.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hutchins</LastName><ForeName>John T</ForeName><Initials>JT</Initials><AffiliationInfo><Affiliation>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720, United States of America.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wong</LastName><ForeName>Michelle K</ForeName><Initials>MK</Initials><AffiliationInfo><Affiliation>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720, United States of America.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Blaisdell</LastName><ForeName>G Kai</ForeName><Initials>GK</Initials><AffiliationInfo><Affiliation>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720, United States of America.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Cooper</LastName><ForeName>Monica L</ForeName><Initials>ML</Initials><AffiliationInfo><Affiliation>University of California Cooperative Extension, 1710 Soscol Avenue, Suite 4, Napa, CA, 94559, United States of America.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Daane</LastName><ForeName>Kent M</ForeName><Initials>KM</Initials><AffiliationInfo><Affiliation>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720, United States of America.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Almeida</LastName><ForeName>Rodrigo P P</ForeName><Initials>RP</Initials><AffiliationInfo><Affiliation>Department of Environmental Science, Policy and Management, University of California, Berkeley, California, 94720, United States of America.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2015</Year><Month>11</Month><Day>03</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>PLoS One</MedlineTA><NlmUniqueID>101285081</NlmUniqueID><ISSNLinking>1932-6203</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D002140" MajorTopicYN="N" Type="Geographic">California</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D029381" MajorTopicYN="N">Closteroviridae</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName><QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D027843" MajorTopicYN="N">Vitis</DescriptorName><QualifierName UI="Q000821" MajorTopicYN="Y">virology</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2015</Year><Month>07</Month><Day>10</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2015</Year><Month>10</Month><Day>16</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2015</Year><Month>11</Month><Day>4</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2015</Year><Month>11</Month><Day>4</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2016</Year><Month>6</Month><Day>9</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">26529503</ArticleId><ArticleId IdType="doi">10.1371/journal.pone.0142120</ArticleId><ArticleId IdType="pii">PONE-D-15-30401</ArticleId><ArticleId IdType="pmc">PMC4631472</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>J Virol Methods. 2007 Apr;141(1):22-9</Citation><ArticleIdList><ArticleId IdType="pubmed">17223203</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytopathology. 2008 Oct;98(10):1093-8</Citation><ArticleIdList><ArticleId IdType="pubmed">18943455</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytopathology. 2002 Sep;92(9):928-35</Citation><ArticleIdList><ArticleId IdType="pubmed">18944017</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytopathology. 2010 Aug;100(8):830-4</Citation><ArticleIdList><ArticleId 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Sharma</name></noRegion><name sortKey="Almeida, Rodrigo P P" sort="Almeida, Rodrigo P P" uniqKey="Almeida R" first="Rodrigo P P" last="Almeida">Rodrigo P P. Almeida</name><name sortKey="Baraff, Breanna" sort="Baraff, Breanna" uniqKey="Baraff B" first="Breanna" last="Baraff">Breanna Baraff</name><name sortKey="Blaisdell, G Kai" sort="Blaisdell, G Kai" uniqKey="Blaisdell G" first="G Kai" last="Blaisdell">G Kai Blaisdell</name><name sortKey="Cooper, Monica L" sort="Cooper, Monica L" uniqKey="Cooper M" first="Monica L" last="Cooper">Monica L. Cooper</name><name sortKey="Daane, Kent M" sort="Daane, Kent M" uniqKey="Daane K" first="Kent M" last="Daane">Kent M. Daane</name><name sortKey="Hutchins, John T" sort="Hutchins, John T" uniqKey="Hutchins J" first="John T" last="Hutchins">John T. Hutchins</name><name sortKey="Wong, Michelle K" sort="Wong, Michelle K" uniqKey="Wong M" first="Michelle K" last="Wong">Michelle K. 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HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:26529503" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a GrapevineDiseaseV1
| This area was generated with Dilib version V0.6.37. |  |